fix: keep only source-map extracted node_modules, exclude pnpm artifacts

Restore node_modules to exact state from cli.js.map extraction:
- Move .ignored/ and .ignored_* files back to original package paths
- Remove pnpm symlinks (replaced by real source-map directories)
- Update .gitignore: only exclude /dist/, .pnpm/, .bin/, .ignored* dirs
- All package dist/ folders are now preserved as part of source-map files

After clone, run `pnpm install` to get pnpm-managed symlinks for building.
The committed node_modules contains the original TypeScript/JS source files
as bundled in cli.js.

claude-code-source/node_modules/lodash-es/_baseIsEqual.js

@@ -0,0 +1,28 @@
+import baseIsEqualDeep from './_baseIsEqualDeep.js';
+import isObjectLike from './isObjectLike.js';
+
+/**
+ * The base implementation of `_.isEqual` which supports partial comparisons
+ * and tracks traversed objects.
+ *
+ * @private
+ * @param {*} value The value to compare.
+ * @param {*} other The other value to compare.
+ * @param {boolean} bitmask The bitmask flags.
+ *  1 - Unordered comparison
+ *  2 - Partial comparison
+ * @param {Function} [customizer] The function to customize comparisons.
+ * @param {Object} [stack] Tracks traversed `value` and `other` objects.
+ * @returns {boolean} Returns `true` if the values are equivalent, else `false`.
+ */
+function baseIsEqual(value, other, bitmask, customizer, stack) {
+  if (value === other) {
+    return true;
+  }
+  if (value == null || other == null || (!isObjectLike(value) && !isObjectLike(other))) {
+    return value !== value && other !== other;
+  }
+  return baseIsEqualDeep(value, other, bitmask, customizer, baseIsEqual, stack);
+}
+
+export default baseIsEqual;