fix: keep only source-map extracted node_modules, exclude pnpm artifacts

Restore node_modules to exact state from cli.js.map extraction:
- Move .ignored/ and .ignored_* files back to original package paths
- Remove pnpm symlinks (replaced by real source-map directories)
- Update .gitignore: only exclude /dist/, .pnpm/, .bin/, .ignored* dirs
- All package dist/ folders are now preserved as part of source-map files

After clone, run `pnpm install` to get pnpm-managed symlinks for building.
The committed node_modules contains the original TypeScript/JS source files
as bundled in cli.js.

claude-code-source/node_modules/lodash-es/_baseAssignValue.js

@@ -0,0 +1,25 @@
+import defineProperty from './_defineProperty.js';
+
+/**
+ * The base implementation of `assignValue` and `assignMergeValue` without
+ * value checks.
+ *
+ * @private
+ * @param {Object} object The object to modify.
+ * @param {string} key The key of the property to assign.
+ * @param {*} value The value to assign.
+ */
+function baseAssignValue(object, key, value) {
+  if (key == '__proto__' && defineProperty) {
+    defineProperty(object, key, {
+      'configurable': true,
+      'enumerable': true,
+      'value': value,
+      'writable': true
+    });
+  } else {
+    object[key] = value;
+  }
+}
+
+export default baseAssignValue;