fix: keep only source-map extracted node_modules, exclude pnpm artifacts

Restore node_modules to exact state from cli.js.map extraction:
- Move .ignored/ and .ignored_* files back to original package paths
- Remove pnpm symlinks (replaced by real source-map directories)
- Update .gitignore: only exclude /dist/, .pnpm/, .bin/, .ignored* dirs
- All package dist/ folders are now preserved as part of source-map files

After clone, run `pnpm install` to get pnpm-managed symlinks for building.
The committed node_modules contains the original TypeScript/JS source files
as bundled in cli.js.

claude-code-source/node_modules/lodash-es/_apply.js

@@ -0,0 +1,21 @@
+/**
+ * A faster alternative to `Function#apply`, this function invokes `func`
+ * with the `this` binding of `thisArg` and the arguments of `args`.
+ *
+ * @private
+ * @param {Function} func The function to invoke.
+ * @param {*} thisArg The `this` binding of `func`.
+ * @param {Array} args The arguments to invoke `func` with.
+ * @returns {*} Returns the result of `func`.
+ */
+function apply(func, thisArg, args) {
+  switch (args.length) {
+    case 0: return func.call(thisArg);
+    case 1: return func.call(thisArg, args[0]);
+    case 2: return func.call(thisArg, args[0], args[1]);
+    case 3: return func.call(thisArg, args[0], args[1], args[2]);
+  }
+  return func.apply(thisArg, args);
+}
+
+export default apply;