fix: keep only source-map extracted node_modules, exclude pnpm artifacts

Restore node_modules to exact state from cli.js.map extraction:
- Move .ignored/ and .ignored_* files back to original package paths
- Remove pnpm symlinks (replaced by real source-map directories)
- Update .gitignore: only exclude /dist/, .pnpm/, .bin/, .ignored* dirs
- All package dist/ folders are now preserved as part of source-map files

After clone, run `pnpm install` to get pnpm-managed symlinks for building.
The committed node_modules contains the original TypeScript/JS source files
as bundled in cli.js.

claude-code-source/node_modules/highlight.js/lib/languages/flix.js

@@ -0,0 +1,54 @@
+/*
+ Language: Flix
+ Category: functional
+ Author: Magnus Madsen <mmadsen@uwaterloo.ca>
+ Website: https://flix.dev/
+ */
+
+ /** @type LanguageFn */
+function flix(hljs) {
+  const CHAR = {
+    className: 'string',
+    begin: /'(.|\\[xXuU][a-zA-Z0-9]+)'/
+  };
+
+  const STRING = {
+    className: 'string',
+    variants: [{
+      begin: '"',
+      end: '"'
+    }]
+  };
+
+  const NAME = {
+    className: 'title',
+    relevance: 0,
+    begin: /[^0-9\n\t "'(),.`{}\[\]:;][^\n\t "'(),.`{}\[\]:;]+|[^0-9\n\t "'(),.`{}\[\]:;=]/
+  };
+
+  const METHOD = {
+    className: 'function',
+    beginKeywords: 'def',
+    end: /[:={\[(\n;]/,
+    excludeEnd: true,
+    contains: [NAME]
+  };
+
+  return {
+    name: 'Flix',
+    keywords: {
+      literal: 'true false',
+      keyword: 'case class def else enum if impl import in lat rel index let match namespace switch type yield with'
+    },
+    contains: [
+      hljs.C_LINE_COMMENT_MODE,
+      hljs.C_BLOCK_COMMENT_MODE,
+      CHAR,
+      STRING,
+      METHOD,
+      hljs.C_NUMBER_MODE
+    ]
+  };
+}
+
+module.exports = flix;